New pages
- 16:15, 29 October 2009 $1 (hist) [2 bytes] Markdayel (Talk | contribs) (Created page with '$1')
- 17:34, 7 May 2009 Radial Force Movies (hist) [496 bytes] Markdayel (Talk | contribs) (Created page with 'To make the radial force movies, use the makeradialmovie script (which uses the gplot.sc gplot script). The syntax is makeradialmovie <startframe> <endframe> You currently nee...')
- 16:53, 26 April 2009 Description of the Model (hist) [3,749 bytes] Markdayel (Talk | contribs) (Created page with '=Description of model= Figure 1: Schematic of node and link arrangement The <code>comet</code> program is a Monte-Carlo/Lagrangian model ...')
- 16:39, 26 April 2009 Implementation in C++ (hist) [5,727 bytes] Markdayel (Talk | contribs) (Created page with '=Implementation in C++= The code is written in C++ for speed. We attempt to use an somewhat object-based approach, but a good many of the member variables are declared as static...')
- 17:22, 16 April 2009 3D Reconstructions of in vitro Unconstrained Shells (hist) [1,062 bytes] Markdayel (Talk | contribs) (Created page with '[http://www.dayel.com/comet/supmat/movies/FigS9_MM2-Rx4-01.mov http://www.dayel.com/comet/supmat/movies/thumbnails/FigS9_MM2-Rx4-01.mov.png] Constrained Shell #1 [http://www.d...')
- 17:21, 16 April 2009 3D Reconstructions of in vitro Constrained Shells (hist) [893 bytes] Markdayel (Talk | contribs) (Created page with '[http://www.dayel.com/comet/supmat/movies/FigS8_MM2-Rx6-01.mov http://www.dayel.com/comet/supmat/movies/thumbnails/FigS8_MM2-Rx6-01.mov.png] Constrained Shell #1 [http://www.d...')
- 17:21, 16 April 2009 Ellipsoid and Capsule symmetry breaking (hist) [399 bytes] Markdayel (Talk | contribs) (Created page with '[http://www.dayel.com/comet/supmat/movies/FigS7a_Ellipsoid_vtk_.mov http://www.dayel.com/comet/supmat/movies/thumbnails/FigS7a_Ellipsoid_vtk_.mov.png] Sideways symmetry breaking...')
- 17:19, 16 April 2009 Circumferential and Radial measurements (hist) [847 bytes] Markdayel (Talk | contribs) (Created page with ' [http://www.dayel.com/comet/supmat/movies/FigS6b_vtk_radial_trimmed.mov http://www.dayel.com/comet/supmat/movies/thumbnails/FigS6b_vtk_radial_trimmed.mov.png] Radial measuremen...')
- 17:19, 16 April 2009 Forces during Symmetry Breaking (hist) [418 bytes] Markdayel (Talk | contribs) (Created page with '==Circumferential and Radial measurements== [http://www.dayel.com/comet/supmat/movies/FigS4a_circ_measure_vtk_.mov http://www.dayel.com/comet/supmat/movies/thumbnails/FigS4a_cir...')
- 17:18, 16 April 2009 Symmetry Breaking and Motility (hist) [652 bytes] Markdayel (Talk | contribs) (Created page with 'Click on the thumbnails below to play example movies. ==Symmetry Breaking and Motility== [http://www.dayel.com/comet/supmat/movies/FigS1_Data09_roi_frame_.mov http://www.dayel...')
- 13:48, 16 April 2009 Using Git (hist) [756 bytes] Markdayel (Talk | contribs) (Created page with '[http://zrusin.blogspot.com/2007/09/git-cheat-sheet.html This cheat sheet] is a good summary of useful git commands. To have changes you've made merged into the main repository,...')
- 11:37, 15 April 2009 Display settings (hist) [6,063 bytes] Markdayel (Talk | contribs) (Created page with 'Many settings in the <code>cometparams.ini</code> affect the way data is displayed. ==Bitmap display settings== ===Basic settings=== X_BMP true Y_BMP ...')
- 09:04, 14 April 2009 Model Robustness (hist) [811 bytes] Markdayel (Talk | contribs) (Created page with '==Robustness test: LINK_BREAKAGE_FORCE== 600px ==Robustness test: LINK_FORCE== 600px ==Robustness te...')
- 12:07, 13 April 2009 Detailed Program Flow (hist) [149 bytes] Markdayel (Talk | contribs) (Created page with '=Implementation in C++= The code is written in C++ for speed. We attempt to use an somewhat object-based approach, but a good many of the member variables are declared as stati...') originally created as "Implementation"
- 10:48, 13 April 2009 Program Flow (hist) [217 bytes] Markdayel (Talk | contribs) (Created page with 'Figure 1: Comet program flow The program works in an iterative loop: creating new nodes and links, and updating the positions of existin...') originally created as "How comet works"
- 10:25, 13 April 2009 To Do (hist) [610 bytes] Markdayel (Talk | contribs) (Created page with '*XML import/export format. **At the moment, if we change the load/save code to add a variable etc, the save file format changes so we can't load old datasets. Current workarou...')
- 10:19, 13 April 2009 Known Issues (hist) [68 bytes] Markdayel (Talk | contribs) (Created page with ' *As of 04-13-09 seems to be some issue with the symmetry breaking thread crashing. Seems to work fine to just run 'comet post 0:0' after the run is complete')
- 09:56, 13 April 2009 Running comet on a cluster (hist) [2,672 bytes] Markdayel (Talk | contribs) (Created page with 'We highly recommend running 'comet' on a cluster of machines, rather than one. The program takes some time to run (an hour or two for early events like symmetry breaking; overni...') originally created as "Recommendations for running comet"
- 20:20, 12 April 2009 Examples (hist) [4,104 bytes] Markdayel (Talk | contribs) (Created page with '==Symmetry Breaking and Motility== [http://www.dayel.com/comet/supmat/movies/FigS1_Data09_roi_frame_.mov http://www.dayel.com/comet/supmat/movies/thumbnails/FigS1_Data09_roi_fra...') originally created as "Supmat"
- 18:02, 10 April 2009 Node Tracks (hist) [3,651 bytes] Markdayel (Talk | contribs) (Created page with 'You can use node tracks to see where the network goes. Turn network tracks with the following setting in cometparams.ini. e.g. BMP_TRACKS true # turns on node tracking ...')
