CometWiki

CometWiki

Welcome to CometWiki. This site describes the set up and usage of `comet' the actin-based motility simulator.

Usage

Examples Symmetry Breaking and Motility Example simulation run 2D (from Figure 1 in paper) 3D links view of above example Forces during Symmetry Breaking Forces and link breaks during symmetry breaking Link breaks during smooth motility Circumferential and Radial measurements Circumferential measurements during symmetry breaking Radial measurements during symmetry breaking Circumferential measurements during smooth motilty Radial measurements during smooth motilty Ellipsoid and Capsule symmetry breaking Sideways symmetry breaking of ellipsoid (3D) Sideways symmetry breaking of capsule (2D) 3D Reconstructions of in vitro Constrained Shells Shell #1 Shell #2 Shell #3 Shell #4 3D Reconstructions of in vitro Unconstrained Shells Shell #1 Shell #2 (3-lobed split) Shell #3 Shell #4 Shell #5

Installing Detailed instructions for downloading and installing comet on OS X, Linux or Windows can be found here Running the program Simple instructions for running the program from the command line can be found here Settings The program reads its settings from a file called cometparams.ini. Here is an overview of the main parameters. In Depth Node Tracks Scripts